Preheat your oven to 350 degrees F and line a cupcake tin with cupcake liners, you should get about 10 cupcakes.
In a large bowl, whisk together your almond flour, tapioca flour, baking soda, cinnamon, and salt. Set aside.
In a medium size bowl, mix together your mashed bananas, egg, almond milk, sugar, butter, and vanilla extract until well combined. Whisk your banana mixture into your dry mixture and whisk until there are no clumps left, then fold in your chocolate chips.
Fill your prepared cupcake liners about 3/4 full with your cupcake batter and bake for 22-24 minutes. Allow to cool completely before icing!
Once your cupcakes are completely cooled, make your cream cheese frosting by placing all of your frosting ingredients in the bowl of a stand mixer or a large bowl with a hand mixer. Whisk until well combined and smooth, and then frost your cupcakes! Enjoy!